Glossary
- constraint
enforced and not able to be violated sets of values in modelling (e.g. distances, coordinates etc.)
- restraint
favored and able to be violated (up to some degree) sets of values in modelling (e.g. distances, coordinates etc.)
- series
groups of modelling targets (a kind of target selection) to which specific modelling parameters can be applied
- subunit
single protein chain which is part of the modelling target system
- particle
set of system entities like atom, group of atoms, residues, protein chains etc. (depends on hierarchy)
- selector
method for grouping (or selecting) particles, subunits, system states etc.
- representation resolution
target system’s coarse grained or even atomic representation
- transformation matrix
sets of coordinates dictating the final rotation and translation moves of particles